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Trends in the prevalence and antibiotic susceptibility of anaerobic Gram-negative bacteria causing clinical infections in Estonia

K. Lõivukene iD, K. Kermes iD, E. Sepp iD, P. Naaber iD, R. Mändar iD, S. Kõljalg iD

Sri Lankan Journal of Infectious Diseases 13(1) · 2023

https://doi.org/10.4038/sljid.v13i1.8494

Abstract

Objective: The aim of our study was to describe the species distribution and changes in the resistance profile of anaerobic bacteria isolated at Tartu University Hospital. Methods: The data for 2010, 2016 and 2020 were analysed retrospectively. The strains were identified by Vitek2 (2010) and MALDI-TOF MS (2016, 2020); and the MIC values for the antibiotics were determined using gradient tests. Resistance was interpreted using EUCAST breakpoints. Results: The average number of anaerobic cultures received during the 10 years increased from 1551 to 5983; (386%).. The most common pathogens were Gram negative anaerobic rod-shaped bacteria (Bacteroides fragilis, Bacteroides spp., Fusobacterium spp. and Prevotella spp.). The percentage of susceptible strains in the three years studied was stable for the majority of drug-bug combinations tested, except beta-lactam antibiotic sensitivity (Bacteroides spp. sensitivity to imipenem and ampicillin-sulbactam, Fusobacterium spp. and Prevotella spp. to penicillin). There were significant differences in the MIC values (p

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